Iron & Rust in San Diego Water: What You Should Know
If you’ve noticed yellow water, brown spots, or a metallic taste in your tap water, you’re not alone. Across San Diego and surrounding communities, residents frequently encounter signs of iron contamination in their water supply—especially in neighborhoods with aging plumbing or private wells. While iron is a naturally occurring mineral that the body needs in small amounts, elevated levels of iron can lead to rusty water, plumbing damage, and even potential health concerns.
Let’s explore how iron particles enter San Diego’s water, the risks of iron overload, and how Culligan of San Diego can help you restore clean, safe water in your home.

Four Types Of Iron
Understanding the different forms of iron, their effects, and how to treat them is essential for keeping your water clean and your plumbing system running smoothly.
Red Iron
Ferric iron is an oxidized, insoluble form that is visible in water as a reddish tint. It often causes staining on fixtures and in laundry. While some water softeners can remove small amounts, iron filters—such as Culligan’s Iron-Cleer® system—are specifically designed to remove red water iron from your water supply.
Clear Iron
Ferrous iron is dissolved in water and can pass through pipes unnoticed until it oxidizes when exposed to air, causing discoloration. It often originates from groundwater sources and is best treated with a Culligan Water Softener, which uses ion exchange to remove the iron, particularly in homes with low pH levels.
Organic Iron
Organic iron forms when iron binds with organic matter like tannins, often present in shallow wells. This combination results in dark-colored water or black residue in containers. It’s more difficult to filter and typically requires customized water treatment systems.
Iron Bacteria
Iron bacteria thrive in iron-rich groundwater and leave behind dark, slimy deposits in toilet tanks and on plumbing fixtures. These bacteria also create foul odors and unpleasant tastes. While shock chlorination can help temporarily, reducing the iron content in your water is the only long-term solution.
What Causes Rusty or Discolored Water in San Diego?
San Diego’s water supply is sourced from a combination of imported water (from the Colorado River and Northern California via the State Water Project) and local surface water and groundwater. This supply is managed by the City of San Diego Public Utilities Department and other regional agencies. While treated to meet federal and state standards, residents may still experience orange water, cloudy water, or discolored water due to local factors such as:
- Corroded plumbing, especially galvanized pipes in older homes
- Iron-rich soils and naturally-occurring sediments in the region
- Buildup of iron bacteria in pipes or plumbing systems
- Copper corrosion that can cause blue-green stains and bitter taste
- Sediment and rust inside aging hot water heaters
- Disturbances from nearby construction or public utility maintenance
- Leaching from faucet washers, hose bibs, and deteriorating valves
Even homes connected to the municipal water supply may experience rust issues if plumbing is outdated or not properly maintained. Discolored cold water or warm water from a faucet may signal corrosion within the home’s plumbing.
How Can Iron Enter Well Water in San Diego County?
In areas of San Diego County where private wells are still in use—such as parts of Ramona, Alpine, or Valley Center—iron can infiltrate well water through natural and environmental processes:
- Local soil and rock formations that are naturally high in iron content
- Corrosion of iron pipes or fittings releasing rust particles into water
- Surface water runoff from nearby agricultural activity introducing contaminants
- Groundwater movement drawing iron-rich minerals into wells
- Iron bacteria thriving in warm, mineral-rich aquifers common to the region
These conditions can lead to yellow water, metallic taste, and staining, especially in homes that rely on untreated or minimally treated private wells.
Common Water Quality Issues from Iron in San Diego
Rusty water causes more than just cosmetic issues. It can result in household frustration, shortened appliance lifespan, and concerns about water safety.
- Rust Particles & Iron Stains
Ferric iron creates visible rust marks on sinks, toilets, and bathtubs. It may also lead to calcium buildup and staining on plumbing fixtures and shower heads. Removing these marks often requires chlorine bleach or commercial rust removers. - Cloudy or Murky Water
White water or murky water may be caused by excess sediment, air, or dissolved iron. This type of water raises concerns about cleanliness and may discourage its use for drinking or cooking. - Metallic Taste or Odor
If your glass of water has a metallic taste or smells unpleasant, elevated iron levels or copper corrosion may be the cause. These symptoms are more common in lukewarm water or water drawn from an idle hot water heater. - Biofilm and Slime
Iron bacteria create a slimy buildup inside pipes and a noticeable film around faucets and in toilet tanks. These bacteria also contribute to foul-smelling water and may increase the risk of bacteria in drinking water or algae-affected water under certain conditions.
Is Iron in San Diego Water a Health Risk?
While the EPA classifies iron as a secondary contaminant—not typically hazardous to human health—high concentrations may contribute to indirect health risks, especially when combined with other contaminants like chlorine disinfection byproducts, arsenic, or excess sediment.
People most at risk from long-term iron exposure include:
- Pregnant individuals
- Infants and young children
- Those with iron overload disorders such as hemochromatosis
- Immunocompromised individuals
Even when iron levels fall below the EPA’s secondary standard of 0.3 mg/L, it can still affect water’s taste, odor, and appearance. The safest way to assess your water quality is through testing by certified laboratories that can measure precise levels of iron and other contaminants.
Water Treatment Options in San Diego
Culligan of San Diego provides custom water treatment solutions to address the region’s specific water quality concerns, including iron and rust.
Water Softeners
Culligan water softeners are designed to remove ferrous iron and reduce calcium buildup through ion exchange, providing soft water that protects your plumbing and improves appliance efficiency.
Water Testing
Sediment filters are ideal for homes dealing with orange sediment or naturally-occurring particles. Culligan also offers independent water testing performed by certified laboratory personnel to identify issues and build a personalized treatment plan.
What You Can Do at Home
- Flush pipes using a gallon of water if taps have been stagnant
- Regularly clean faucet aerators and shower head screens
- Use liquid detergents to reduce residue on clothes and fixtures
- Work with a licensed plumber or water expert for persistent rust problems
Schedule Your Free Water Test in San Diego
If you’ve been dealing with rust stains, cold water discoloration, or a strange taste in your drinking water, now is the time to take action. Culligan of San Diego offers free water testing in San Diego, Chula Vista, El Cajon, La Mesa, Poway, and surrounding areas.
We’ll evaluate your iron content, calcium levels, and any potential health risks based on your specific location and plumbing conditions. Our experts will then recommend the best treatment method to deliver clean, high-quality water to every tap in your home.
Don’t let metallic-tasting or discolored water impact your daily life. Contact Culligan of San Diego today and take control of your home’s water quality.
Solutions
Suggested Products

Aquasential™ Smart High Efficiency Water Softener
- Smart brine tank auto-monitors salt levels
- Convenient auto-bypass valve
- Reliable non-corrosive valve
- Worry-free maintenance

Aquasential™ Smart High Efficiency Whole House Water Filters
Reduce sediments in your water and contaminants that cause your water to appear, taste, and smell unpleasant. Your system can also lessen the taste and odor of chlorine, and prevent pipe damage and staining from low pH water. Additional customizations include:
- Culligan® Filtr-Cleer® Water Filters – Reduces Sediment Problems
- Culligan® Cullar® Water Filters – Reduces Taste and Odor Problems
- Culligan® Cullneu Water Filters – Reduces Acid Problems
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